Loading...
Welcome to the Regeneron COVID-19 Dashboard
This dashboard contains aggregated information on SARS-CoV-2 (hCoV-19) genomes and associated patient metadata, gathered in partnership with the GISAID initiative.
The goal of the dashboard is to enable scientists to understand the evolution of this emerging coronavirus by monitoring and displaying pertinent information. For example, the dashboard displays the novel mutations in SARS-CoV-2 (hCoV-19) genomes across time and geographical location, which facilitates the identification of a mutation that may increase transmission or virulence.
In addition, there is de-identified patient demographic information such as country of origin, patient status, and age, which provides further insights into the populations most susceptible to the virus.
Top Lineages Per Country (Past 12 Weeks)
Loading...
Top* Lineages (Past 12 Weeks)
| Lineage | Country | Percent | Lineage Count | Total Count | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
B.1.617.2B.1.617.2 Mutations
|
Turkey | 88% | 31,782 | 35,944 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Montenegro | 84% | 62 | 74 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Estonia | 83% | 819 | 989 | ||||||
AY.4AY.4 Mutations
|
Lithuania | 83% | 3,567 | 4,310 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Bosnia and Herzegovina | 81% | 54 | 67 | ||||||
AY.4AY.4 Mutations
|
United Kingdom | 80% | 261,584 | 327,492 | ||||||
AY.4AY.4 Mutations
|
Austria | 79% | 1,872 | 2,360 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Croatia | 78% | 1,112 | 1,433 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Norway | 72% | 4,336 | 6,060 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Finland | 65% | 1,078 | 1,668 | ||||||
AY.4AY.4 Mutations
|
Ireland | 63% | 5,040 | 8,000 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Netherlands | 61% | 6,559 | 10,771 | ||||||
AY.4AY.4 Mutations
|
Romania | 60% | 1,409 | 2,330 | ||||||
AY.4AY.4 Mutations
|
Portugal | 60% | 2,717 | 4,543 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Kosovo | 59% | 256 | 434 | ||||||
AY.4AY.4 Mutations
|
Poland | 57% | 2,409 | 4,253 | ||||||
AY.4AY.4 Mutations
|
France | 56% | 11,292 | 20,039 | ||||||
AY.4AY.4 Mutations
|
Switzerland | 56% | 10,157 | 18,111 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Russia | 55% | 490 | 884 | ||||||
AY.4AY.4 Mutations
|
Denmark | 54% | 17,776 | 32,676 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Sweden | 52% | 8,116 | 15,504 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Bulgaria | 49% | 562 | 1,150 | ||||||
AY.4AY.4 Mutations
|
Germany | 48% | 32,216 | 67,041 | ||||||
AY.4AY.4 Mutations
|
Spain | 48% | 4,042 | 8,417 | ||||||
AY.4AY.4 Mutations
|
Slovenia | 47% | 3,202 | 6,793 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Greece | 47% | 621 | 1,334 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Czechia | 47% | 1,312 | 2,820 | ||||||
AY.9AY.9 Mutations
|
Iceland | 46% | 771 | 1,661 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Belgium | 46% | 5,642 | 12,160 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Italy | 46% | 5,144 | 11,087 | ||||||
AY.4AY.4 Mutations
|
Slovakia | 46% | 1,073 | 2,350 | ||||||
AY.4AY.4 Mutations
|
Gibraltar | 41% | 94 | 229 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Slovenia | 40% | 2,688 | 6,793 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Slovakia | 37% | 864 | 2,350 | ||||||
AY.4AY.4 Mutations
|
Bulgaria | 34% | 394 | 1,150 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Germany | 33% | 21,895 | 67,041 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Spain | 31% | 2,649 | 8,417 | ||||||
AY.4AY.4 Mutations
|
Belgium | 30% | 3,615 | 12,160 | ||||||
AY.4AY.4 Mutations
|
Czechia | 29% | 818 | 2,820 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Denmark | 28% | 9,244 | 32,676 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Romania | 27% | 638 | 2,330 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Poland | 27% | 1,130 | 4,253 | ||||||
AY.4AY.4 Mutations
|
Finland | 26% | 440 | 1,668 | ||||||
AY.4AY.4 Mutations
|
Russia | 26% | 231 | 884 | ||||||
AY.4AY.4 Mutations
|
Italy | 25% | 2,827 | 11,087 | ||||||
AY.4AY.4 Mutations
|
Sweden | 23% | 3,574 | 15,504 | ||||||
B.1.617.2B.1.617.2 Mutations
|
France | 22% | 4,508 | 20,039 | ||||||
AY.9AY.9 Mutations
|
Greece | 22% | 300 | 1,334 | ||||||
AY.4AY.4 Mutations
|
Kosovo | 22% | 94 | 434 | ||||||
AY.4AY.4 Mutations
|
Iceland | 22% | 358 | 1,661 | ||||||
AY.4AY.4 Mutations
|
Greece | 21% | 286 | 1,334 | ||||||
AY.9AY.9 Mutations
|
Gibraltar | 21% | 49 | 229 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Switzerland | 20% | 3,679 | 18,111 | ||||||
AY.4AY.4 Mutations
|
Norway | 20% | 1,214 | 6,060 | ||||||
AY.9AY.9 Mutations
|
Netherlands | 18% | 1,966 | 10,771 | ||||||
AY.5AY.5 Mutations
|
Portugal | 16% | 749 | 4,543 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Ireland | 16% | 1,292 | 8,000 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Iceland | 16% | 267 | 1,661 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Gibraltar | 16% | 36 | 229 | ||||||
AY.9AY.9 Mutations
|
Bulgaria | 12% | 137 | 1,150 | ||||||
AY.9AY.9 Mutations
|
Slovakia | 11% | 255 | 2,350 | ||||||
AY.4AY.4 Mutations
|
Netherlands | 11% | 1,166 | 10,771 | ||||||
B.1.617.2B.1.617.2 Mutations
|
United Kingdom | 11% | 34,449 | 327,492 |
| Lineage | Country | Percent | Lineage Count | Total Count | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
B.1.617.2B.1.617.2 Mutations
|
Guatemala | 87% | 60 | 69 | ||||||
AY.34AY.34 Mutations
|
Martinique | 79% | 94 | 119 | ||||||
AY.34AY.34 Mutations
|
France (Martinique) | 74% | 91 | 123 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Guadeloupe | 57% | 112 | 197 | ||||||
AY.25AY.25 Mutations
|
Canada | 51% | 15,327 | 30,292 | ||||||
AY.20AY.20 Mutations
|
Mexico | 50% | 3,214 | 6,401 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Costa Rica | 50% | 136 | 271 | ||||||
B.1.617.2B.1.617.2 Mutations
|
United States | 48% | 178,543 | 375,397 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Sint Maarten | 46% | 515 | 1,131 | ||||||
AY.9AY.9 Mutations
|
Sint Maarten | 45% | 512 | 1,131 | ||||||
B.1.617.2B.1.617.2 Mutations
|
U.S. Virgin Islands | 37% | 48 | 130 | ||||||
AY.26AY.26 Mutations
|
U.S. Virgin Islands | 36% | 47 | 130 | ||||||
AY.27AY.27 Mutations
|
Canada | 31% | 9,241 | 30,292 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Puerto Rico | 30% | 218 | 719 | ||||||
AY.3AY.3 Mutations
|
Puerto Rico | 27% | 196 | 719 | ||||||
AY.26AY.26 Mutations
|
Mexico | 22% | 1,430 | 6,401 | ||||||
AY.4AY.4 Mutations
|
Guadeloupe | 22% | 44 | 197 | ||||||
AY.25AY.25 Mutations
|
Puerto Rico | 18% | 129 | 719 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Mexico | 17% | 1,080 | 6,401 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Canada | 15% | 4,573 | 30,292 | ||||||
AY.25AY.25 Mutations
|
United States | 15% | 55,553 | 375,397 | ||||||
AY.25AY.25 Mutations
|
U.S. Virgin Islands | 12% | 16 | 130 | ||||||
B.1.1.7B.1.1.7 Mutations
|
France (Martinique) | 12% | 15 | 123 | ||||||
AY.3AY.3 Mutations
|
United States | 11% | 42,492 | 375,397 | ||||||
AY.4AY.4 Mutations
|
United States | 11% | 42,404 | 375,397 | ||||||
AY.25AY.25 Mutations
|
Costa Rica | 11% | 30 | 271 | ||||||
AY.4AY.4 Mutations
|
Puerto Rico | 10% | 74 | 719 |
| Lineage | Country | Percent | Lineage Count | Total Count | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
B.1.617.2B.1.617.2 Mutations
|
Vietnam | 98% | 235 | 241 | ||||||
AY.23AY.23 Mutations
|
Singapore | 95% | 3,158 | 3,324 | ||||||
AY.29AY.29 Mutations
|
Japan | 93% | 19,790 | 21,327 | ||||||
AY.33AY.33 Mutations
|
Maldives | 89% | 226 | 255 | ||||||
B.1.617.2B.1.617.2 Mutations
|
South Korea | 87% | 2,203 | 2,540 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Pakistan | 76% | 180 | 237 | ||||||
AY.23AY.23 Mutations
|
Indonesia | 66% | 558 | 841 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Hong Kong | 64% | 72 | 113 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Nepal | 56% | 47 | 84 | ||||||
B.1.1.7B.1.1.7 Mutations
|
Cambodia | 52% | 253 | 488 | ||||||
AY.4AY.4 Mutations
|
Israel | 51% | 96 | 189 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Kazakhstan | 50% | 46 | 92 | ||||||
AY.23AY.23 Mutations
|
Malaysia | 50% | 716 | 1,434 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Jordan | 49% | 47 | 96 | ||||||
AY.28AY.28 Mutations
|
Sri Lanka | 48% | 278 | 581 | ||||||
AY.16AY.16 Mutations
|
Kazakhstan | 48% | 44 | 92 | ||||||
AY.30AY.30 Mutations
|
Thailand | 46% | 311 | 674 | ||||||
AY.4AY.4 Mutations
|
Bangladesh | 42% | 157 | 372 | ||||||
AY.4AY.4 Mutations
|
Bahrain | 42% | 135 | 321 | ||||||
B.1.617.2B.1.617.2 Mutations
|
India | 42% | 1,355 | 3,248 | ||||||
AY.4AY.4 Mutations
|
Jordan | 42% | 40 | 96 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Bangladesh | 41% | 154 | 372 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Malaysia | 38% | 543 | 1,434 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Kuwait | 34% | 23 | 67 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Sri Lanka | 33% | 189 | 581 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Thailand | 32% | 217 | 674 | ||||||
AY.30AY.30 Mutations
|
Cambodia | 32% | 157 | 488 | ||||||
AY.26AY.26 Mutations
|
Bahrain | 32% | 102 | 321 | ||||||
AY.4AY.4 Mutations
|
India | 23% | 747 | 3,248 | ||||||
AY.33AY.33 Mutations
|
Nepal | 23% | 19 | 84 | ||||||
AY.4AY.4 Mutations
|
Pakistan | 21% | 49 | 237 | ||||||
AY.12AY.12 Mutations
|
Israel | 21% | 39 | 189 | ||||||
AY.26AY.26 Mutations
|
Kuwait | 19% | 13 | 67 | ||||||
AY.4AY.4 Mutations
|
Kuwait | 18% | 12 | 67 | ||||||
AY.24AY.24 Mutations
|
Indonesia | 18% | 150 | 841 | ||||||
AY.33AY.33 Mutations
|
India | 16% | 506 | 3,248 | ||||||
AY.4AY.4 Mutations
|
Sri Lanka | 13% | 77 | 581 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Bahrain | 12% | 40 | 321 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Israel | 11% | 20 | 189 |
| Lineage | Country | Percent | Lineage Count | Total Count | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
B.1.617.2B.1.617.2 Mutations
|
New Zealand | 97% | 1,329 | 1,373 | ||||||
AY.30AY.30 Mutations
|
Australia | 62% | 7,051 | 11,316 | ||||||
AY.24AY.24 Mutations
|
Papua New Guinea | 46% | 69 | 149 | ||||||
AY.23AY.23 Mutations
|
Papua New Guinea | 44% | 65 | 149 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Australia | 32% | 3,675 | 11,316 |
| Lineage | Country | Percent | Lineage Count | Total Count | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
B.1.617.2B.1.617.2 Mutations
|
Suriname | 64% | 79 | 124 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Brazil | 62% | 5,912 | 9,541 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Bonaire | 60% | 145 | 243 | ||||||
AY.9AY.9 Mutations
|
Curacao | 58% | 122 | 210 | ||||||
B.1.621B.1.621 Mutations
|
Colombia | 52% | 558 | 1,065 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Paraguay | 48% | 24 | 50 | ||||||
AY.4AY.4 Mutations
|
French Guiana | 43% | 83 | 191 | ||||||
AY.9AY.9 Mutations
|
Bonaire | 37% | 90 | 243 | ||||||
B.1.617.2B.1.617.2 Mutations
|
French Guiana | 34% | 65 | 191 | ||||||
AY.25AY.25 Mutations
|
Aruba | 33% | 367 | 1,118 | ||||||
B.1B.1 Mutations
|
Ecuador | 32% | 26 | 81 | ||||||
P.1P.1 Mutations
|
Argentina | 29% | 102 | 351 | ||||||
AY.5AY.5 Mutations
|
Paraguay | 28% | 14 | 50 | ||||||
AY.4AY.4 Mutations
|
Aruba | 28% | 309 | 1,118 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Curacao | 27% | 56 | 210 | ||||||
P.1P.1 Mutations
|
Suriname | 26% | 32 | 124 | ||||||
C.37C.37 Mutations
|
Peru | 24% | 424 | 1,732 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Chile | 21% | 759 | 3,572 | ||||||
P.1P.1 Mutations
|
Chile | 21% | 739 | 3,572 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Aruba | 20% | 228 | 1,118 | ||||||
AY.25AY.25 Mutations
|
Chile | 18% | 649 | 3,572 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Peru | 17% | 291 | 1,732 | ||||||
AY.9AY.9 Mutations
|
Aruba | 17% | 185 | 1,118 | ||||||
C.37C.37 Mutations
|
Argentina | 17% | 58 | 351 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Argentina | 15% | 54 | 351 | ||||||
B.1.621B.1.621 Mutations
|
Chile | 15% | 545 | 3,572 | ||||||
P.1.12P.1.12 Mutations
|
Peru | 15% | 263 | 1,732 | ||||||
P.1P.1 Mutations
|
French Guiana | 14% | 26 | 191 | ||||||
AY.4AY.4 Mutations
|
Peru | 14% | 234 | 1,732 | ||||||
P.1.7P.1.7 Mutations
|
Peru | 13% | 225 | 1,732 | ||||||
AY.4AY.4 Mutations
|
Ecuador | 11% | 9 | 81 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Ecuador | 11% | 9 | 81 | ||||||
AY.5AY.5 Mutations
|
Curacao | 11% | 23 | 210 |
| Lineage | Country | Percent | Lineage Count | Total Count | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
AY.36AY.36 Mutations
|
Nigeria | 70% | 582 | 831 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Reunion | 63% | 329 | 526 | ||||||
AY.4AY.4 Mutations
|
Seychelles | 62% | 71 | 114 | ||||||
AY.33AY.33 Mutations
|
Botswana | 62% | 274 | 440 | ||||||
B.1.617.2B.1.617.2 Mutations
|
France (Réunion Island) | 58% | 34 | 59 | ||||||
AY.16AY.16 Mutations
|
Kenya | 42% | 113 | 270 | ||||||
AY.4AY.4 Mutations
|
South Africa | 40% | 1,054 | 2,650 | ||||||
AY.4AY.4 Mutations
|
Kenya | 33% | 88 | 270 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Botswana | 30% | 133 | 440 | ||||||
AY.4AY.4 Mutations
|
France (Réunion Island) | 29% | 17 | 59 | ||||||
AY.7.1AY.7.1 Mutations
|
Ghana | 26% | 16 | 62 | ||||||
AY.4AY.4 Mutations
|
Ghana | 24% | 15 | 62 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Ghana | 18% | 11 | 62 | ||||||
AY.32AY.32 Mutations
|
South Africa | 16% | 436 | 2,650 | ||||||
B.1.617.2B.1.617.2 Mutations
|
South Africa | 16% | 428 | 2,650 | ||||||
AY.4AY.4 Mutations
|
Nigeria | 15% | 126 | 831 | ||||||
AY.4AY.4 Mutations
|
Reunion | 14% | 73 | 526 | ||||||
AY.36AY.36 Mutations
|
Ghana | 13% | 8 | 62 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Kenya | 12% | 32 | 270 | ||||||
AY.7.1AY.7.1 Mutations
|
Seychelles | 11% | 12 | 114 |
| Lineage | State | Percent | Lineage Count | Total Count | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
AY.25AY.25 Mutations
|
Guam | 77% | 20 | 26 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Idaho | 66% | 2,516 | 3,792 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Hawaii | 64% | 697 | 1,097 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Montana | 60% | 1,148 | 1,908 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Nevada | 59% | 3,037 | 5,125 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Utah | 59% | 4,133 | 7,005 | ||||||
B.1.617.2B.1.617.2 Mutations
|
California | 59% | 31,673 | 53,811 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Vermont | 58% | 2,204 | 3,796 | ||||||
B.1.617.2B.1.617.2 Mutations
|
New Mexico | 57% | 2,059 | 3,610 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Virginia | 56% | 2,968 | 5,312 | ||||||
B.1.617.2B.1.617.2 Mutations
|
North Carolina | 54% | 6,588 | 12,108 | ||||||
B.1.617.2B.1.617.2 Mutations
|
South Carolina | 54% | 2,761 | 5,097 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Arizona | 54% | 4,750 | 8,769 | ||||||
B.1.617.2B.1.617.2 Mutations
|
West Virginia | 54% | 2,523 | 4,709 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Delaware | 53% | 706 | 1,322 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Oregon | 53% | 2,923 | 5,517 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Florida | 52% | 9,111 | 17,505 | ||||||
B.1.617.2B.1.617.2 Mutations
|
New Hampshire | 52% | 644 | 1,250 | ||||||
B.1.617.2B.1.617.2 Mutations
|
New York | 51% | 8,777 | 17,045 | ||||||
B.1.617.2B.1.617.2 Mutations
|
District of Columbia | 51% | 910 | 1,770 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Pennsylvania | 51% | 2,485 | 4,861 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Maine | 50% | 747 | 1,503 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Alaska | 50% | 1,491 | 3,001 | ||||||
B.1.617.2B.1.617.2 Mutations
|
New Jersey | 49% | 3,496 | 7,164 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Massachusetts | 48% | 11,778 | 24,326 | ||||||
B.1.617.2B.1.617.2 Mutations
|
South Dakota | 48% | 374 | 773 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Georgia | 48% | 5,776 | 12,072 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Rhode Island | 47% | 1,048 | 2,251 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Maryland | 46% | 2,887 | 6,271 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Alabama | 45% | 1,980 | 4,376 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Texas | 44% | 8,640 | 19,552 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Northern Mariana Islands | 43% | 10 | 23 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Illinois | 43% | 3,466 | 7,975 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Connecticut | 43% | 1,890 | 4,369 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Ohio | 43% | 3,253 | 7,636 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Wisconsin | 42% | 2,652 | 6,247 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Indiana | 42% | 2,330 | 5,536 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Kentucky | 42% | 2,188 | 5,242 | ||||||
B.1.617.2B.1.617.2 Mutations
|
North Dakota | 42% | 588 | 1,413 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Washington | 41% | 5,249 | 12,762 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Arkansas | 38% | 936 | 2,445 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Oklahoma | 38% | 368 | 971 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Missouri | 38% | 1,568 | 4,146 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Michigan | 37% | 1,621 | 4,379 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Colorado | 37% | 6,206 | 16,770 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Iowa | 36% | 1,320 | 3,617 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Kansas | 36% | 1,164 | 3,240 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Louisiana | 35% | 1,530 | 4,404 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Wyoming | 34% | 1,450 | 4,309 | ||||||
AY.4AY.4 Mutations
|
Minnesota | 32% | 5,590 | 17,212 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Tennessee | 31% | 2,855 | 9,113 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Nebraska | 31% | 1,025 | 3,339 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Mississippi | 27% | 919 | 3,413 |
Top Emerging* Lineages (Past 12 Weeks)
| Lineage | Country | 2-Week Period | Change | Previous Support | Current Support | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
AY.4AY.4 Mutations
|
Slovakia | 2021-10-04 | 23% -> 62% (+39%) | 22 / 97 | 29 / 47 | ||||||
AY.4AY.4 Mutations
|
Turkey | 2021-08-23 | 0% -> 36% (+36%) | 144 / 30,581 | 478 / 1,319 | ||||||
AY.4AY.4 Mutations
|
Russia | 2021-09-20 | 23% -> 55% (+32%) | 68 / 298 | 79 / 143 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Slovenia | 2021-09-20 | 45% -> 76% (+31%) | 898 / 1,989 | 174 / 230 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Romania | 2021-09-06 | 15% -> 37% (+22%) | 80 / 540 | 327 / 880 | ||||||
B.1.617.2B.1.617.2 Mutations
|
France | 2021-10-04 | 37% -> 59% (+21%) | 684 / 1,841 | 188 / 321 | ||||||
AY.4AY.4 Mutations
|
Iceland | 2021-08-23 | 17% -> 37% (+21%) | 210 / 1,263 | 148 / 398 | ||||||
AY.26AY.26 Mutations
|
Czechia | 2021-09-20 | 7% -> 26% (+19%) | 62 / 952 | 107 / 412 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Denmark | 2021-10-04 | 29% -> 46% (+16%) | 1,395 / 4,764 | 1,723 / 3,786 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Finland | 2021-08-23 | 57% -> 73% (+16%) | 572 / 1,006 | 360 / 495 | ||||||
AY.4AY.4 Mutations
|
Sweden | 2021-10-04 | 32% -> 48% (+16%) | 512 / 1,616 | 58 / 122 | ||||||
AY.4AY.4 Mutations
|
Greece | 2021-08-23 | 9% -> 22% (+13%) | 16 / 175 | 72 / 321 | ||||||
AY.33AY.33 Mutations
|
Netherlands | 2021-10-04 | 5% -> 18% (+13%) | 83 / 1,649 | 15 / 83 | ||||||
AY.4AY.4 Mutations
|
Norway | 2021-10-04 | 24% -> 37% (+13%) | 189 / 782 | 20 / 54 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Poland | 2021-09-20 | 21% -> 33% (+12%) | 262 / 1,242 | 376 / 1,146 | ||||||
AY.9AY.9 Mutations
|
Gibraltar | 2021-08-23 | 17% -> 28% (+11%) | 23 / 137 | 26 / 92 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Switzerland | 2021-10-04 | 19% -> 31% (+11%) | 547 / 2,809 | 69 / 223 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Belgium | 2021-09-06 | 43% -> 54% (+11%) | 1,529 / 3,564 | 1,206 / 2,228 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Spain | 2021-10-04 | 28% -> 39% (+11%) | 213 / 753 | 44 / 113 | ||||||
AY.4.1AY.4.1 Mutations
|
Kosovo | 2021-09-06 | 2% -> 12% (+10%) | 1 / 64 | 25 / 216 | ||||||
AY.4AY.4 Mutations
|
Germany | 2021-08-23 | 39% -> 47% (+8%) | 5,080 / 13,079 | 9,046 / 19,119 | ||||||
AY.5AY.5 Mutations
|
Croatia | 2021-09-06 | 6% -> 14% (+8%) | 38 / 631 | 5 / 36 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Italy | 2021-10-04 | 44% -> 52% (+7%) | 841 / 1,893 | 393 / 758 | ||||||
AY.4AY.4 Mutations
|
Lithuania | 2021-09-06 | 80% -> 86% (+6%) | 953 / 1,196 | 743 / 869 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Portugal | 2021-09-06 | 6% -> 12% (+5%) | 71 / 1,098 | 127 / 1,089 | ||||||
AY.4AY.4 Mutations
|
Austria | 2021-08-23 | 76% -> 82% (+5%) | 469 / 614 | 758 / 930 | ||||||
AY.33AY.33 Mutations
|
Estonia | 2021-08-23 | 1% -> 4% (+2%) | 5 / 371 | 13 / 369 |
| Lineage | Country | 2-Week Period | Change | Previous Support | Current Support | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
AY.26AY.26 Mutations
|
U.S. Virgin Islands | 2021-08-23 | 9% -> 78% (+69%) | 6 / 67 | 21 / 27 | ||||||
AY.4AY.4 Mutations
|
Puerto Rico | 2021-09-20 | 6% -> 36% (+30%) | 12 / 185 | 13 / 36 | ||||||
AY.34AY.34 Mutations
|
France (Martinique) | 2021-08-23 | 62% -> 86% (+24%) | 30 / 48 | 25 / 29 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Guadeloupe | 2021-09-06 | 47% -> 64% (+17%) | 31 / 66 | 38 / 59 | ||||||
AY.34AY.34 Mutations
|
Martinique | 2021-09-06 | 69% -> 84% (+15%) | 22 / 32 | 21 / 25 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Sint Maarten | 2021-09-20 | 49% -> 62% (+14%) | 72 / 148 | 71 / 114 | ||||||
AY.25AY.25 Mutations
|
Costa Rica | 2021-09-20 | 5% -> 17% (+12%) | 3 / 60 | 6 / 35 | ||||||
B.1.617.2B.1.617.2 Mutations
|
United States | 2021-10-04 | 51% -> 61% (+11%) | 24,809 / 48,886 | 3,791 / 6,173 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Canada | 2021-09-20 | 14% -> 19% (+6%) | 756 / 5,504 | 90 / 463 |
| Lineage | Country | 2-Week Period | Change | Previous Support | Current Support | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
B.1.617.2B.1.617.2 Mutations
|
Nepal | 2021-09-20 | 28% -> 81% (+53%) | 12 / 43 | 17 / 21 | ||||||
AY.28AY.28 Mutations
|
Sri Lanka | 2021-10-04 | 33% -> 81% (+48%) | 24 / 73 | 38 / 47 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Pakistan | 2021-08-23 | 43% -> 91% (+48%) | 33 / 76 | 111 / 122 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Malaysia | 2021-09-20 | 36% -> 79% (+43%) | 122 / 341 | 19 / 24 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Japan | 2021-09-06 | 3% -> 45% (+43%) | 137 / 4,933 | 70 / 154 | ||||||
AY.23AY.23 Mutations
|
Indonesia | 2021-09-20 | 53% -> 85% (+32%) | 80 / 151 | 33 / 39 | ||||||
B.1.617.2B.1.617.2 Mutations
|
India | 2021-09-20 | 62% -> 89% (+26%) | 307 / 494 | 77 / 87 | ||||||
AY.30AY.30 Mutations
|
Cambodia | 2021-09-20 | 21% -> 47% (+26%) | 28 / 132 | 50 / 106 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Thailand | 2021-09-20 | 34% -> 59% (+24%) | 54 / 157 | 44 / 75 | ||||||
AY.26AY.26 Mutations
|
Bahrain | 2021-09-20 | 26% -> 47% (+21%) | 58 / 227 | 44 / 94 | ||||||
AY.24AY.24 Mutations
|
Hong Kong | 2021-08-23 | 4% -> 21% (+18%) | 1 / 27 | 10 / 47 | ||||||
AY.23AY.23 Mutations
|
Singapore | 2021-08-23 | 84% -> 96% (+12%) | 552 / 655 | 968 / 1,007 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Bangladesh | 2021-09-20 | 34% -> 45% (+11%) | 30 / 88 | 10 / 22 | ||||||
AY.4AY.4 Mutations
|
Jordan | 2021-09-20 | 41% -> 47% (+7%) | 11 / 27 | 27 / 57 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Vietnam | 2021-08-23 | 93% -> 99% (+6%) | 51 / 55 | 128 / 129 | ||||||
AY.33AY.33 Mutations
|
Maldives | 2021-09-20 | 86% -> 91% (+5%) | 90 / 105 | 89 / 98 | ||||||
B.1.617.2B.1.617.2 Mutations
|
South Korea | 2021-09-06 | 86% -> 91% (+5%) | 907 / 1,057 | 505 / 556 |
| Lineage | Country | 2-Week Period | Change | Previous Support | Current Support | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
AY.30AY.30 Mutations
|
Australia | 2021-09-20 | 40% -> 77% (+38%) | 1,220 / 3,068 | 889 / 1,149 | ||||||
AY.24AY.24 Mutations
|
Papua New Guinea | 2021-09-06 | 38% -> 73% (+35%) | 39 / 102 | 19 / 26 | ||||||
B.1.617.2B.1.617.2 Mutations
|
New Zealand | 2021-08-23 | 88% -> 99% (+10%) | 153 / 173 | 606 / 615 |
| Lineage | Country | 2-Week Period | Change | Previous Support | Current Support | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
B.1.617.2B.1.617.2 Mutations
|
French Guiana | 2021-09-06 | 12% -> 71% (+60%) | 3 / 26 | 45 / 63 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Suriname | 2021-08-23 | 30% -> 82% (+52%) | 13 / 43 | 46 / 56 | ||||||
AY.4AY.4 Mutations
|
Peru | 2021-09-20 | 21% -> 49% (+28%) | 97 / 468 | 18 / 37 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Chile | 2021-09-06 | 14% -> 34% (+20%) | 156 / 1,096 | 389 / 1,145 | ||||||
AY.25AY.25 Mutations
|
Aruba | 2021-08-23 | 25% -> 45% (+20%) | 160 / 628 | 118 / 261 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Bonaire | 2021-08-23 | 47% -> 66% (+19%) | 21 / 45 | 40 / 61 | ||||||
P.1P.1 Mutations
|
Argentina | 2021-08-23 | 24% -> 39% (+15%) | 40 / 167 | 59 / 152 | ||||||
AY.33AY.33 Mutations
|
Brazil | 2021-09-20 | 0% -> 12% (+12%) | 13 / 2,978 | 46 / 375 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Curacao | 2021-09-06 | 23% -> 33% (+9%) | 11 / 47 | 19 / 58 | ||||||
AY.20AY.20 Mutations
|
Colombia | 2021-09-06 | 1% -> 8% (+7%) | 5 / 496 | 5 / 66 |
| Lineage | Country | 2-Week Period | Change | Previous Support | Current Support | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
B.1.617.2B.1.617.2 Mutations
|
Botswana | 2021-09-06 | 25% -> 81% (+56%) | 67 / 265 | 55 / 68 | ||||||
AY.32AY.32 Mutations
|
South Africa | 2021-09-20 | 13% -> 46% (+33%) | 73 / 572 | 59 / 129 | ||||||
AY.4AY.4 Mutations
|
Reunion | 2021-09-06 | 17% -> 43% (+26%) | 27 / 158 | 34 / 79 | ||||||
AY.36AY.36 Mutations
|
Nigeria | 2021-08-23 | 64% -> 77% (+13%) | 289 / 452 | 239 / 309 | ||||||
AY.4AY.4 Mutations
|
Kenya | 2021-09-06 | 28% -> 39% (+10%) | 41 / 145 | 17 / 44 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Seychelles | 2021-08-23 | 6% -> 13% (+8%) | 4 / 69 | 6 / 45 |
| Lineage | State | 2-Week Period | Change | Previous Support | Current Support | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
B.1.617.2B.1.617.2 Mutations
|
Minnesota | 2021-10-04 | 26% -> 60% (+35%) | 1,096 / 4,254 | 58 / 96 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Maine | 2021-10-04 | 44% -> 75% (+31%) | 59 / 133 | 15 / 20 | ||||||
AY.4AY.4 Mutations
|
Georgia | 2021-10-04 | 5% -> 36% (+30%) | 49 / 912 | 10 / 28 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Ohio | 2021-10-04 | 48% -> 75% (+27%) | 373 / 771 | 30 / 40 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Michigan | 2021-09-20 | 37% -> 63% (+26%) | 486 / 1,303 | 470 / 744 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Vermont | 2021-08-23 | 41% -> 66% (+25%) | 234 / 569 | 560 / 844 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Tennessee | 2021-09-20 | 30% -> 51% (+22%) | 1,012 / 3,415 | 95 / 185 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Colorado | 2021-10-04 | 46% -> 66% (+21%) | 829 / 1,819 | 110 / 166 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Oklahoma | 2021-09-20 | 35% -> 55% (+20%) | 118 / 340 | 17 / 31 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Wisconsin | 2021-10-04 | 56% -> 76% (+20%) | 453 / 810 | 59 / 78 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Massachusetts | 2021-08-23 | 29% -> 48% (+19%) | 1,411 / 4,918 | 2,893 / 6,029 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Missouri | 2021-09-20 | 38% -> 58% (+19%) | 489 / 1,274 | 110 / 191 | ||||||
B.1.617.2B.1.617.2 Mutations
|
South Carolina | 2021-09-20 | 53% -> 70% (+17%) | 687 / 1,307 | 312 / 447 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Florida | 2021-09-20 | 45% -> 61% (+16%) | 2,042 / 4,520 | 1,031 / 1,689 | ||||||
AY.4AY.4 Mutations
|
Mississippi | 2021-10-04 | 6% -> 21% (+16%) | 24 / 430 | 6 / 28 | ||||||
B.1.617.2B.1.617.2 Mutations
|
District of Columbia | 2021-09-20 | 46% -> 61% (+15%) | 250 / 547 | 182 / 300 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Arkansas | 2021-09-20 | 41% -> 55% (+14%) | 138 / 335 | 56 / 101 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Oregon | 2021-09-06 | 51% -> 64% (+14%) | 830 / 1,642 | 570 / 887 | ||||||
AY.4AY.4 Mutations
|
Washington | 2021-09-20 | 26% -> 40% (+14%) | 760 / 2,930 | 703 / 1,774 | ||||||
AY.3AY.3 Mutations
|
New Hampshire | 2021-09-20 | 7% -> 20% (+14%) | 25 / 367 | 55 / 269 | ||||||
B.1.617.2B.1.617.2 Mutations
|
South Dakota | 2021-08-23 | 44% -> 57% (+13%) | 107 / 242 | 148 / 260 | ||||||
AY.4AY.4 Mutations
|
Illinois | 2021-10-04 | 7% -> 19% (+13%) | 51 / 752 | 6 / 31 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Pennsylvania | 2021-09-20 | 48% -> 60% (+12%) | 655 / 1,353 | 655 / 1,086 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Hawaii | 2021-08-23 | 57% -> 69% (+12%) | 212 / 373 | 314 / 458 | ||||||
AY.26AY.26 Mutations
|
Utah | 2021-10-04 | 4% -> 16% (+12%) | 16 / 392 | 6 / 38 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Maryland | 2021-09-20 | 45% -> 56% (+11%) | 555 / 1,232 | 386 / 687 | ||||||
AY.25AY.25 Mutations
|
Rhode Island | 2021-10-04 | 20% -> 31% (+11%) | 83 / 414 | 9 / 29 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Indiana | 2021-09-20 | 40% -> 51% (+11%) | 641 / 1,589 | 601 / 1,176 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Arizona | 2021-09-06 | 49% -> 60% (+10%) | 1,186 / 2,407 | 1,316 / 2,202 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Alabama | 2021-09-20 | 38% -> 49% (+10%) | 375 / 979 | 52 / 107 | ||||||
B.1.617.2B.1.617.2 Mutations
|
North Dakota | 2021-08-23 | 41% -> 52% (+10%) | 212 / 511 | 125 / 242 | ||||||
AY.4AY.4 Mutations
|
Nevada | 2021-09-20 | 7% -> 16% (+9%) | 85 / 1,248 | 203 / 1,254 | ||||||
AY.16AY.16 Mutations
|
North Carolina | 2021-10-04 | 0% -> 10% (+9%) | 3 / 996 | 6 / 63 | ||||||
AY.4AY.4 Mutations
|
Idaho | 2021-09-20 | 13% -> 21% (+9%) | 112 / 888 | 119 / 561 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Kansas | 2021-09-06 | 33% -> 42% (+8%) | 316 / 950 | 392 / 942 | ||||||
AY.4AY.4 Mutations
|
Connecticut | 2021-09-20 | 10% -> 18% (+8%) | 125 / 1,268 | 114 / 631 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Texas | 2021-09-20 | 42% -> 50% (+8%) | 2,632 / 6,323 | 710 / 1,428 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Iowa | 2021-10-04 | 35% -> 43% (+8%) | 192 / 549 | 21 / 49 | ||||||
AY.4AY.4 Mutations
|
Nebraska | 2021-09-06 | 19% -> 27% (+7%) | 199 / 1,041 | 230 / 866 | ||||||
B.1.617.2B.1.617.2 Mutations
|
New Jersey | 2021-09-20 | 47% -> 54% (+7%) | 964 / 2,069 | 667 / 1,240 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Virginia | 2021-09-20 | 59% -> 66% (+7%) | 828 / 1,411 | 336 / 511 | ||||||
B.1.617.2B.1.617.2 Mutations
|
Delaware | 2021-09-06 | 49% -> 56% (+7%) | 129 / 261 | 137 / 244 | ||||||
AY.25AY.25 Mutations
|
West Virginia | 2021-09-20 | 12% -> 19% (+7%) | 173 / 1,395 | 85 / 448 | ||||||
AY.3AY.3 Mutations
|
Wyoming | 2021-09-06 | 11% -> 18% (+7%) | 149 / 1,297 | 181 / 1,003 | ||||||
B.1.617.2B.1.617.2 Mutations
|
California | 2021-10-04 | 60% -> 66% (+6%) | 3,803 / 6,387 | 1,014 / 1,541 | ||||||
AY.25AY.25 Mutations
|
New Mexico | 2021-09-20 | 14% -> 20% (+6%) | 102 / 723 | 108 / 535 | ||||||
AY.3AY.3 Mutations
|
Louisiana | 2021-09-20 | 15% -> 21% (+6%) | 79 / 527 | 61 / 290 | ||||||
AY.7.1AY.7.1 Mutations
|
New York | 2021-10-04 | 2% -> 5% (+3%) | 55 / 2,906 | 18 / 348 | ||||||
AY.24AY.24 Mutations
|
Montana | 2021-09-06 | 1% -> 2% (+2%) | 2 / 360 | 17 / 729 |
Data Timeline
Loading...
Loading...
Dashboard Timeline
April 16, 2021
08:50PM
Dashboard UI/graphs updated
Added emerging lineages tracking and top lineages tracking per US state to home page
April 16, 2021
08:00PM
Dashboard backend pipeline overhauled
Overhauled backend pipeline to automatically download and QC data from GISAID daily
April 05, 2021
03:30PM
Dashboard UI/graphs updated
Added top and emerging lineage maps and graphs. Overhauled home page
March 23, 2021
06:00PM
Dashboard performance overhauled
Added caching and refactored all graphs for performance before public release
November 13, 2020
04:00PM
Dashboard UI/graphs updated
Broad-scale update across the entire dashboard to prepare for its launch onto the world wide web!
June 15, 2020
12:00AM
Dashboard graphs upgraded
Migrated dashboard graphs from Plotly to ECharts
June 04, 2020
08:06PM
Dashboard data source changed
Upgraded dashboard to use a database vs flat files. 3x reduction in load time
June 02, 2020
12:18PM
Dashboard UI upgraded
Overhauled dashboard user interface to use bs4dash
May 26, 2020
12:00AM
Variant tracking expanded
Began tracking variants in genes ORF1a and ORF1b
May 11, 2020
12:00AM
Variant tracking expanded
Began tracking variants in genes E, M, N, ORF3a, ORF7a, ORF8, and ORF10
April 27, 2020
12:00AM
Phylogenetic analysis added
Added tab containing viral genome evolutionary relationships
April 03, 2020
12:00AM
Automated QC pipeline created
Cleans up metadata fields such as age, collection date, gender, etc
April 02, 2020
10:36AM
First version of dashboard created
Created first version with shinydashboard. Data is ingested from flat files
March 31, 2020
12:00AM
Patient metadata tracking started
Began downloading patient metadata for all genomes
January 10, 2020
12:00AM
First data downloaded
Began downloading genomes from GISAID and subsequent variant calling
Loading...
Loading...